PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj6g3v2006500.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 231aa    MW: 26133.6 Da    PI: 8.7905
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj6g3v2006500.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.31.8e-33561971128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......s 80 
                      lp+G++F+P+d+e++ e+L++kv ++ ++l+     +i++++    i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      +
  Lj6g3v2006500.1  56 LPAGVKFDPNDQEIL-EHLEAKVVSDVCKLHPlidqFIPTLQgdngICYTHPEKLP-GVSKDGQVRHFFHRPSKAYTTGTRKRRKVHtddegsE 147
                      799***********9.99*****99995543333332433322334**********.566677888******************7444565557 PP

              NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                       +W++tgk+++v++ +g+++g kk++v+y   gr++k+ekt+Wvmh+y+l
  Lj6g3v2006500.1 148 TRWHKTGKTRAVFAGGGAVKGFKKIMVLYtnFGRQRKPEKTNWVMHQYHL 197
                      88***************************5547999************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3751216IPR003441NAC domain
PROSITE profilePS5100533.47856216IPR003441NAC domain
PfamPF023656.7E-1557197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MKWCNDSDKE KGNEYLITPT NTPKAIINLT EGIHTIKCPS CSHNMEVRDQ GGIHGLPAGV  60
KFDPNDQEIL EHLEAKVVSD VCKLHPLIDQ FIPTLQGDNG ICYTHPEKLP GVSKDGQVRH  120
FFHRPSKAYT TGTRKRRKVH TDDEGSETRW HKTGKTRAVF AGGGAVKGFK KIMVLYTNFG  180
RQRKPEKTNW VMHQYHLGSN EEEQDGELVV SKVFYQTQPR QCGTSIIRDP P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0096680.0AP009668.1 Lotus japonicus genomic DNA, chromosome 6, clone: LjT04E21, TM0336, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007148112.11e-134hypothetical protein PHAVU_006G181500g
RefseqXP_007148113.11e-134hypothetical protein PHAVU_006G181500g
SwissprotO494591e-112NAC73_ARATH; NAC domain-containing protein 73
TrEMBLA0A151SAN61e-140A0A151SAN6_CAJCA; NAC domain-containing protein 8
STRINGGLYMA07G32250.11e-132(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF122834108
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-105NAC domain containing protein 73